PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00084.1.g00190.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 526aa    MW: 55151.2 Da    PI: 7.9166
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00084.1.g00190.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.9e-18346396256
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                   +y+GVr+++ +gr++AeIrdp     r + ++lg+f++ae Aa+a++aa+++l+g+
  Zpz_sc00084.1.g00190.1.am.mk 346 KYRGVRRRP-SGRYAAEIRDP---A-RkTPIWLGTFDSAEAAARAYDAAARSLRGA 396
                                   8********.7*********8...2.35*************************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103221.628346403IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-27346404IPR001471AP2/ERF domain
PfamPF008471.9E-11346395IPR001471AP2/ERF domain
CDDcd000189.83E-14346402No hitNo description
SuperFamilySSF541715.95E-20346404IPR016177DNA-binding domain
SMARTSM003805.1E-31346409IPR001471AP2/ERF domain
PRINTSPR003674.1E-7347358IPR001471AP2/ERF domain
PRINTSPR003674.1E-7369385IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 526 aa     Download sequence    Send to blast
MNAQYKGDKY PSKGVRFKPV EKEIGDVLLE ELDHRLLLPP QQIQPSSDRS EAALSNPGSK  60
QLKCEECGTQ TNAKETMLAE HGPKLNRQGK RKHFVAEERR RWEQDRAEAN DASGGVKASE  120
RGEGGEKKEA VVAWPGGGGE GDRCGWRKMD EVVRRRTDSL ALSAAGGHVA GVSHLVSAAG  180
AGPGSPPPLE IGAAEDWGGA TERCVATTIP SAVQPRDVAG AAIRQAPPTE HGTMRRAQPP  240
LLLRGGARPA QVREYAVSHY CPSGWRCGHH RHTELSAAPH PAVEESEKSP QARDAPGECH  300
DSAGVRSRAA DPETWTAAAE GRRGGRMPRA RPPPVPAARE AGVEVKYRGV RRRPSGRYAA  360
EIRDPARKTP IWLGTFDSAE AAARAYDAAA RSLRGAAART NFSASASAQV AAPSPAIPPA  420
ATVAAAATSS HSSTVESWSG GGGGGRIGAP GATIAGATRA APAAEEDCRS YCGSSSSVLC  480
DDGVSSAGDE AVAPPTRSSP LPFDLNVADP AAPDEMDWRC DTILHL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-14347402662ATERF1
3gcc_A6e-14347402662ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4494022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53170.11e-11ethylene response factor 8